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Talks & Presentations

Watch the recordings of past events

Seattle Cell Symposium 2022

​SEATTLE CELL SYMPOSIUM - 2022
Day 1: January 27, 2022
Featuring: Ru Gunawardane & Susanne Rafelski, Lucas Pelkmans, Chantell Evans, Brian Beliveau, EMT team, Johannes Schöneberg, & Devin Schweppe
​SEATTLE CELL SYMPOSIUM - 2022
Day 2: January 28, 2022
Featuring: Graham Johnson, David Goodsell, Sanja Vickovic, Shila Ghazanfar, Sabine Petry, Matthew Akamatsu, & Nuclear Morphogenesis team 

Seattle Cell Symposium 2020

​SEATTLE CELL SYMPOSIUM - 2020
Day 1: December 17, 2020
Featuring: Susanne Rafelski, Geeta Narlikar, Alexandra Zidovska, Arjun Raj, Abby Buchwalter Cool, Ting Wu, GW Gant Luxton & Daniel Starr, Megan King & Simon Mochrie, Katharine Ullman & Maho Niwa, & Chris Frick
​SEATTLE CELL SYMPOSIUM - 2020
Day 2: December 18, 2020
Featuring: Ru Gunawardane, Susan Parkhurst, Derek Applewhite, Stem Cell State team, Tools Lightning talks, David Van Valen, Martin Kampmann, Ron Vale

Seattle Cell Symposium 2019

​SEATTLE CELL SYMPOSIUM - 2019
Julie Theriot, University of Washington
Cooperation, competition & conviction in decision-making for motile cells
​SEATTLE CELL SYMPOSIUM - 2019
Alex Paredez, University of Washington
Cytoskeletal innovations for sticking around
​​SEATTLE CELL SYMPOSIUM - 2019
Melissa Hendershott & Rory Donovan-Maiye, Allen Institute for Cell Science
Cell states beyond transcriptomics: integrating structural organization & gene expression in cardiomyocytes
​SEATTLE CELL SYMPOSIUM - 2019
Barry Gumbiner, Seattle Children's Research Institute
What cell biological insights into cadherin regulation reveal about disease processes
​SEATTLE CELL SYMPOSIUM - 2019
Barbara Wakimoto, University of Washington
Bending the rules of organelle biogenesis: views from a highly specialized cell
​SEATTLE CELL SYMPOSIUM - 2019
Claudia Moreno, University of Washington
Better together: Insights into the clustering of ion channels
​SEATTLE CELL SYMPOSIUM - 2019
Steve Henikoff, Fred Hutchinson Cancer Research Center
Genome-wide mapping of protein-DNA interaction dynamics
​SEATTLE CELL SYMPOSIUM - 2019
Megan Riel-Mehan & Chris Frick, Allen Institute for Cell Science
Integrated cells: moving through mitosis and into the nucleus

Seattle Cell Symposium 2018

​SEATTLE CELL SYMPOSIUM - 2018
Rick Horwitz, Allen Institute for Cell Science
Welcome & opening remarks
​SEATTLE CELL SYMPOSIUM - 2018
Keiko Torii, University of Washington
Cellular decision making during stomatal patterning & differentiation in plants
​SEATTLE CELL SYMPOSIUM - 2018
Clemens Cabernard, University of Washington
The molecular cell biology and mechanics of asymmetric cell division
​SEATTLE CELL SYMPOSIUM - 2018
Kami Ahmad, Fred Hutchinson Cancer Research Center
High-throughput chromatin profiling in mutants, tissues, and cells
​SEATTLE CELL SYMPOSIUM - 2018
Lisa Maves, Seattle Children's Research Institute
Using zebrafish to understand how to build a heart
​SEATTLE CELL SYMPOSIUM - 2018
Kaytlyn Gerbin, Allen Institute for Cell Science Team Talk
Mapping cell state from pluripotency to differentiation
​SEATTLE CELL SYMPOSIUM - 2018
Jeff Ranish, Institute for Systems Biology
Proteomic approaches for studying the architecture of macromolecular machines and gene regulatory networks
​SEATTLE CELL SYMPOSIUM - 2018
Yasemin Sancak, University of Washington
Function and regulation of mitochondrial calcium uptake
​SEATTLE CELL SYMPOSIUM - 2018
Jesse Zalatan, University of Washington
Biochemical mechanisms for kinase signaling in the Wnt pathway: What are the scaffold proteins really doing?
​SEATTLE CELL SYMPOSIUM - 2018
Jianxu Chen, Allen Institute for Cell Science
A new open source toolkit for segmenting 3D intracellular structure in microscopy images
​SEATTLE CELL SYMPOSIUM - 2018
David Russell, University of Washington
Universal donor stem cells

Seattle Cell Symposium 2017

​SEATTLE CELL SYMPOSIUM - 2017
Rick Horwitz, Allen Institute for Cell Science
Welcome and opening remarks
​SEATTLE CELL SYMPOSIUM - 2017
David Baker, University of Washington
The coming of age of de novo protein design
​SEATTLE CELL SYMPOSIUM - 2017
Bill Noble, University of Washington
Using Hi-C to interrogate and model dynamic nuclear 3D architecture
​SEATTLE CELL SYMPOSIUM - 2017
Chuck Murry, UW Medicine
Stem cells as building blocks for tissue repair
​SEATTLE CELL SYMPOSIUM - 2017
John Scott, University of Washington
Exploring and exploiting the spatial constraints of local signaling
​SEATTLE CELL SYMPOSIUM - 2017
Rhishikesh Bargaje, Institute for Systems Biology
Single-cell analysis of cell fate branching: from computational pattern recognition to cell state dynamics
​SEATTLE CELL SYMPOSIUM - 2017
Jennifer Nemhauser, University of Washington
Plant logic
​SEATTLE CELL SYMPOSIUM - 2017
Amanda Haupt, Allen Institute for Cell Science
Endogenous gene tagging illuminates cell organization
​SEATTLE CELL SYMPOSIUM - 2017
David Rawlings, Seattle Children's Research Institute
Engineering human primary cells for novel clinical applications
​SEATTLE CELL SYMPOSIUM - 2017
Irina Mueller, Allen Institute for Cell Science
Cell organization during human iPS cell mitosis
​SEATTLE CELL SYMPOSIUM - 2017
David William, Allen Institute for Cell Science
Modeling at the Allen Institute for Cell Science: I want to see a bit more of that
​SEATTLE CELL SYMPOSIUM - 2017
Tom Daniel, University of Washington
Computational models of flows inside muscle cells: do sarcomeres breathe?

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  • About
      Institute
      1. News feed
      2. What we do
      3. Publications
      4. Allen Institute | allenInstitute.org
      5. Careers
      Site
      1. Home page
      2. Site updates
      3. Archived content
  • Allen Cell Collection
      Order cells & plasmids
      1. Cell Catalog
      2. Cell Catalog quickview
      3. Cell Shorts (documentaries on labs using our cells)
      4. Support forum
      Lab methods
      1. Instructional videos for success in the lab
      2. Standard operating procedures (written methods)
      3. Illustrated overviews
      About our hiPS cells
      1. hiPS Cell Structure Overview
      2. Visual Guide to Human Cells
      3. Cell structure observations
      4. Why endogenous tagging?
      5. Differentiation into cardiomyocytes
      6. Genomics
      7. Download cell data (images, genomics, features)
  • Data & Digital Tools
      Online image analysis
      1. Cell Feature Explorer (plotting & 3D viewer)
      2. 3D cell viewer (pre2018)
      3. Deep cell zoom (216,016 cells)
      Online modeling viewers
      1. Visual Guide to Human Cells
      2. Simularium (4D visual analysis)
      3. Integrated Mitotic Stem Cell
      4. └ Z-stack viewer
      5. └ 3D viewer
      6. Allen Integrated Cell viewer
      7. Label-free examples viewer
      8. 3D probabilistic model viewer
      Desktop tools
      1. Allen Cell & Structure Segmenter
      2. AGAVE 3D pathtrace image viewer
      Data & code
      1. Download cell data (images, genomics, features)
      2. Code repositories & software
  • Analysis & Modeling
      Allen Integrated Cell models
      1. Overview
      2. Integrated Mitotic Stem Cell
      3. └ Z-stack viewer
      4. └ 3D viewer
      5. Label-free Determination
      6. └ 3D viewer
      7. 3D Probabilistic Modeling
      8. └ 3D viewer
      9. Visual Guide to Human Cells
      4D biology models
      1. Simularium (online 4D viewer)
      Methodologies
      1. Drug perturbation pilot study
      2. hiPS cells during mitosis
      3. Differentiation into cardiomyocytes
  • Publications
      Articles
      1. All journal publications
      2. Preprints (biorxiv, arxiv)
      Posters
      1. Select posters
  • Education
      Education resources
      1. All Resources
      2. Teaching materials
      Online tools popular with teachers
      1. Visual Guide to Human Cells
      2. Integrated Mitotic Stem Cell
      3. Cell Feature Explorer (interactive plotting & 3D viewer)
      4. 3D cell viewer (pre2018 data)
      5. hiPS cell structure overview
  • Support
      Questions
      1. FAQs
      2. Forum
      Tutorials for digital tools
      1. Digital tool tutorials with videos
      2. Visual Guide tutorial
      3. AGAVE user guide
      Lab methods
      1. Instructional videos for success in the lab
      2. Standard operating procedures (written methods)
      3. Illustrated overviews
  • 🔍
      SEARCHBAR