Highlights
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Label-free Determination
As part of the Allen Integrated Cell, we have developed and implemented a label-free prediction method for determining the location of 3D structures inside the cell, directly from transmitted light images.
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Visual Guide to Human Cells
This visual guide organizes information about human induced pluripotent stem cells into a curated collection of interactive models. Users can rotate and zoom into 3D cells, each segmented from real data for each phase of mitosis, while learning more about individual cell structures and functions.
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Using deep learning to illuminate cell structure
The Allen Integrated Cell unites two cutting-edge technologies to visualize and understand the organization of the major organelles and structures that comprise human induced pluripotent stem cells.
Explore the 3D outputs of these models with our online integrated cell viewer. |
Learn about hiPSCs
(human induced pluripotent stem cells)
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An hiPS cell biology overview & cell structure observations
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An interactive overview of hiPS cell 3D structure & function
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Explore any of our 31,987 3D cell images directly in your web browser
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4 new Research Projects described
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Curated categorization of interphase & mitotic phases across ~9,000 cells
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Observations describing effects of drugs on 3D cellular organization
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Multiple cell structures visualized direct from brightfield imaging
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3D visualization of hIPS cell structure variation
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New ways to explore our data
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Explore & download genomics & transcriptomics data
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Zoom & scroll around all 24,928 segmented cells
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What shape are our hiPS Cells?
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Access cell images & other data using Quilt
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Cells for your lab
We have created a series of gene edited human iPSCs that we use as the foundation for our image data, and that we share with the larger scientific community.
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Obtain cell lines & plasmids for your lab; quality control details
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Step-by-step protocols to generate & image gene-edited hiPSCs successfully
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Videos & tutorials
New videos provided to ensure success in your lab & to overview tools available on allencell.org
Website allencell.org reorganized
The allencell.org website has undergone a major reorganization to improve usability and to make navigation more efficient based on user feedback. Many new pages have been added, and many other pages have changed names or locations. All changes are described on the Site updates page.
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Overview of our processes to generate & analyze our large-scale data
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Track all changes made to data & other information on allencell.org
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Catch up on recent scientific news from the Allen Institute for Cell Science
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