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└ Z-stack viewer
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Download cell data (images, genomics, features)
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└ Z-stack viewer
└ 3D viewer
Label-free Determination
└ 3D viewer
3D Probabilistic Modeling
└ 3D viewer
Visual Guide to Human Cells
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Differentiation into cardiomyocytes
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Visual Guide to Human Cells
Integrated Mitotic Stem Cell
Cell Feature Explorer (interactive plotting & 3D viewer)
3D cell viewer (pre2018 data)
hiPS cell structure overview
Support
Questions
FAQs
Forum
Tutorials for digital tools
Digital tool tutorials with videos
Visual Guide tutorial
AGAVE user guide
Lab methods
Instructional videos for success in the lab
Standard operating procedures (written methods)
Illustrated overviews
🔍
About
Institute
News feed
What we do
Publications
Allen Institute | allenInstitute.org
Site
Home page
Site updates
Archived content
Allen Cell Collection
Order cells & plasmids
Cell Catalog
Cell Catalog quickview
Cell Shorts (documentaries on labs using our cells)
Support forum
Lab methods
Instructional videos for success in the lab
Standard operating procedures (written methods)
Illustrated overviews
About our hiPS cells
hiPS Cell Structure Overview
Visual Guide to Human Cells
Cell structure observations
Why endogenous tagging?
Differentiation into cardiomyocytes
Genomics
Download cell data (images, genomics, features)
Data & Digital Tools
Online image analysis
Cell Feature Explorer (plotting & 3D viewer)
3D cell viewer (pre2018)
Deep cell zoom (216,016 cells)
Online modeling viewers
Visual Guide to Human Cells
Simularium (4D visual analysis)
Integrated Mitotic Stem Cell
└ Z-stack viewer
└ 3D viewer
Allen Integrated Cell viewer
Label-free examples viewer
3D probabilistic model viewer
Desktop tools
Allen Cell & Structure Segmenter
AGAVE 3D pathtrace image viewer
Data & code
Download cell data (images, genomics, features)
Code repositories & software
Analysis & Modeling
Allen Integrated Cell models
Overview
Integrated Mitotic Stem Cell
└ Z-stack viewer
└ 3D viewer
Label-free Determination
└ 3D viewer
3D Probabilistic Modeling
└ 3D viewer
Visual Guide to Human Cells
4D biology models
Simularium (online 4D viewer)
Methodologies
Drug perturbation pilot study
hiPS cells during mitosis
Differentiation into cardiomyocytes
Publications
Articles
All journal publications
Preprints (biorxiv, arxiv)
Posters
Select posters
Education
Education resources
All Resources
Written lessons (CourseSource & more)
How teachers use our resources (videos)
Online tools popular with teachers
Visual Guide to Human Cells
Integrated Mitotic Stem Cell
Cell Feature Explorer (interactive plotting & 3D viewer)
3D cell viewer (pre2018 data)
hiPS cell structure overview
Support
Questions
FAQs
Forum
Tutorials for digital tools
Digital tool tutorials with videos
Visual Guide tutorial
AGAVE user guide
Lab methods
Instructional videos for success in the lab
Standard operating procedures (written methods)
Illustrated overviews
🔍
